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Table 4 Gene Ontology (GO) terms for the 155 DE genes

From: Transcriptional analysis of liver from chickens with fast (meat bird), moderate (F1 layer x meat bird cross) and low (layer bird) growth potential

GO ID

GO Function

P-value

Gene IDa

GO Term BP

GO:0042730

Fibrinolysis

7.20E-05

FGA↓, FGB↓, FGG↓, CPB2↓

GO:0034116

Positive regulation of heterotypic cell-cell adhesion

2.20E-04

FGA↓, FGB↓, FGG↓

GO: 0072378

Blood coagulation, fibrin clot formation

2.20E-04

FGB↓, FGG↓, FBLN↓

GO: 2000352

Negative regulation of endothelial cell apoptotic process

3.90E-04

NFE2L2↓, FGA↓, FGB↓, FGG↓

GO: 0051258

Protein polymerization

7.30E-04

FGA↓, FGB↓, FGG↓

GO: 0031639

Plasminogen activation

1.10E-03

FGA↓, FGB↓, FGG↓

GO: 0090277

Positive regulation of peptide hormone secretion

2.00E-03

FGA↓, FGB↓, FGG↓

GO: 0045921

Positive regulation of exocytosis

3.20E-03

FGA↓, FGB↓, FGG↓

GO: 0046326

Positive regulation of glucose import

6.30E-03

INSR↓, NFE2L2↓, SLC1A2↑

GO: 1902042

Negative regulation of extrinsic apoptotic signalling pathway via death domain receptors

7.20E-03

FGA↓, FGB↓, FGG↓

GO:0045907

Positive regulation of vasoconstriction

8.20E-03

FGA↓, FGB↓, FGG↓

GO:0050714

Positive regulation of protein secretion

1.00E-02

FGA↓, FGB↓, FGG↓

GO:0070527

Platelet aggregation

1.70E-02

FGA↓, FGB↓, FGG↓

GO:0051592

Response to calcium ion

1.80E-02

FGA↓, FGB↓, FGG↓

GO:0034599

Cellular response to oxidative stress

2.30E-02

PARP1↑, SLC25A24↑, NFE2L2↓

GO:0043152

Induction of bacterial agglutination

2.60E-02

FGA↓, FGB↓

GO:0010941

Regulation of cell death

3.40E-02

JUN↑, SLC25A24↑

GO:0070374

Positive regulation of ERK1 and ERK2 cascade

3.60E-02

FGA↓, FGB↓, FGG↓, JUN↑

GO:0007160

Cell-matrix adhesion

4.70E-02

FGA↓, FGB↓, FGG↓

GO Term CC

GO:0005577

Fibrinogen complex

1.30E-05

FGA↓, FGB↓, FGG↓

GO:0005938

Cell cortex

1.20E-03

FAM110C↑, FGA, FGG, MYO6↑

GO:0031091

Platelet alpha granule

3.30E-03

FGA↓, FGB↓, FGG↓

GO:0072562

Blood micro-particle

7.00E-03

AHSG↓, FGA↓, FGB↓, FGG↓

GO:0000785

Chromatin

8.90E-03

FBXO18, MAU2, CCND2↑, NFE2L2↓

GO:0070062

Extracellular exosome

2.30E-02

ACAA2↑, AKR1A1↑, AHSG, ANXA13↑, CDHR2↑, CPB2↓, ECI1↓, FTH1↓, FGA↓, FGG↓, FGB↓, FBLNI↓, INSR↓, MRAS↓, MYO6↑, PFKL↑, PTGDS↓, QSOX1↑, REEP5↑, TSTA3↑, UCHL1↑

Go Term MF

GO:0005198

Structural molecule activity

3.50E-02

FGA↓, FGB↓, FGG↓, NES↑

GO:0050662

Coenzyme binding

4.40E-02

GCLC, TSTA3

  1. aDirection of regulation: ↑ Meat bird upregulated (meat bird > cross > layer); ↓ Meat bird downregulated (meat bird < cross < layer)