Gene | Chr. position | Number of specific PCR fragments | Sequence length in bp | CDS length in bp | Gene length in bp | CDS/gene length ratio | Detected mutations | Number of polymorphic sites |
---|---|---|---|---|---|---|---|---|
CBF-D1 | 5D | 1 | 709 | 639 | 639 | 1.00 | no | 0 |
CBF-A3 | 5A | 1 | 790 | 741 | 741 | 1.00 | yes | 4 |
CBF-A5 | 7A | 1 | 1027 | 633 | 633 | 1.00 | yes | 6 |
CBF-A10 | 5A | 1 | 867 | 720 | 720 | 1.00 | yes | 2 |
CBF-A13 | 5A | 1 | 855 | 720 | 720 | 1.00 | yes | 6 |
CBF-A14 | 5A | 2 | 610/748 | 639 | 639 | 1.00 | yes | 6 |
CBF-A15 | 5A | 1 | 786 | 726 | 726 | 1.00 | yes | 7 |
CBF-A18 | 6A | 1 | 1045 | 738 | 738 | 1.00 | yes | 37 |
Dhn1 | 5D | 1 | 936 | 420 | 638 | 0.66 | no | 0 |
VRN-A1 | 5A | 4 | 1039/1097/621/770 | 735 | 11,414 | 0.06 | yes | 15 |
VRN-B1 | 5B | 5 | 600/817/662/467/1077 | 735 | 5498 | 0.13 | yes | 24 |
VRN-D1 | 5D | 4 | 814/1359/1429/705 | 735 | 11,550 | 0.06 | yes | 2 |
VRN-D2 | 4D | 2 | 976/534 | 639 | 1650 | 0.39 | no | 0 |
VRN-B3 | 7B | 2 | 1602/994 | 534 | 1258 | 0.42 | yes | 1 |
Cab | 5A | 1 | 728 | n.a. | n.a. | n.a. | yes | 28 |
Dem | 6B/6D | 1 | 616 | n.a. | n.a. | n.a. | no | 0 |
Tacr7 | 2B | 1 | 765 | n.a. | n.a. | n.a. | yes | 3 |
PPD-B1 | 2B | 6 | 1600/954/927/571/773/378 | 1995 | 3053 | 0.65 | yes | 5 |
PPD-D1 | 2D | 3 | 726/1094/966 | 1983 | 3141 | 0.63 | yes | 109 |
total | Â | 39 | 34,034 | 13,332 | 43,758 | 0.30 | Â | 255 |