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Table 1 The layouts that are supported in the visualizing interface. PhenoSimWeb supports six types of layouts in total

From: An online tool for measuring and visualizing phenotype similarities using HPO

Name

Description

Concentric

This layout displays the association network in a concentric circle.

Breadthfirst

This layout displays the association network in a hierarchical structure.

Circle

This layout displays the association networks in a circle. And the circle layout helps users find out high degree nodes or low degree nodes intuitively.

Cose

Cose is an abbreviation for Compound Spring Embedder. This layout lays out compound graphs using a force-directed simulation.

Cola

This layout displays the association network using a force-directed physics simulation.

Grid

This layout displays the association network in a well-spaced grid.