Table 2 Number of significant eQTLs identified and sorted according to confidence level in all treatments and all models
From: eQTL discovery and their association with severe equine asthma in European Warmblood horses
Treatment: | MCK | LPS | RCA | HDE | Mean |
|---|---|---|---|---|---|
|  | Linear Model, Cis eQTLs, FDR < 0.05 | ||||
Matrix eQTL: Number of eQTLs, All | 5045 | 5750 | 5218 | 6127 | 5535 |
Matrix eQTL: Number of eQTLs, Low Confidence | 1207 | 1250 | 1153 | 1266 | 1219 |
Matrix eQTL: Number of eQTLs, High Confidence | 3838 | 4500 | 4065 | 4861 | 4316 |
|  | Linear Model, Trans eQTLs, FDR < 0.05 | ||||
Matrix eQTL: Number of eQTLs, All | 1244 | 1463 | 1088 | 3496 | 1823 |
Matrix eQTL: Number of eQTLs, Low Confidence | 397 | 379 | 294 | 800 | 468 |
Matrix eQTL: Number of eQTLs, High Confidence | 847 | 1084 | 794 | 2696 | 1244 |