Fig. 6
From: A map of gene expression in neutrophil-like cell lines
An easily searchable online database of neutrophil and neutrophil-like cell gene expression. a-d Gene expression data is shown (normalized FPKM data on a log10 scale) for the indicated genes in undifferentiated PLB-985 cells, PLB-985 cells differentiated with the DMSO only protocol, PLB-985 cells differentiated with the Nutridoma + DMSO protocol, and primary human neutrophils (collated from 3 published studies). Shown is data for select receptors (a), genes related to the production of reactive oxygen species (b), select guanine nucleotide exchange factors (GEFs) for Rho Family GTPases (c) and adhesion molecules (d). e Our collated RNA-seq data is available in an easily searchable form on our lab website: http://collinslab.ucdavis.edu/neutrophilgeneexpression/. Data can be searched by gene name, or by the presence of specific PFAM domains of interest. Data can also be sorted by expression level in any of the samples. In this example, we identify the top 10 genes containing PKINASE domain, ordered by expression level in primary human neutrophils