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Table 1 Biological processes over-represented (p < 0.02) in the co-expression module M11

From: Diel rewiring and positive selection of ancient plant proteins enabled evolution of CAM photosynthesis in Agave

GO ID

GO Term

Corrected P-Value

GO:0009738

Abscisic acid-activated signaling pathway

4.2E-08

GO:0016311

Dephosphorylation

6.2E-08

GO:0071215

Cellular response to abscisic acid stimulus

9.0E-08

GO:0009737

Response to abscisic acid

9.3E-08

GO:0097306

Cellular response to alcohol

5.1E-07

GO:0071396

Cellular response to lipid

6.6E-07

GO:0006470

Protein dephosphorylation

7.0E-07

GO:0097305

Response to alcohol

7.8E-07

GO:0009611

Response to wounding

4.6E-06

GO:0009745

Sucrose mediated signaling

4.8E-04

GO:0009753

Response to jasmonic acid

6.3E-04

GO:0019722

Calcium-mediated signaling

1.7E-03

GO:0009788

Negative regulation of abscisic acid-activated signaling pathway

1.8E-03

GO:1901420

Negative regulation of response to alcohol

1.8E-03

GO:0009694

Jasmonic acid metabolic process

2.5E-03

GO:1901419

Regulation of response to alcohol

2.6E-03

GO:0009787

Regulation of abscisic acid-activated signaling pathway

2.6E-03

GO:0009968

Negative regulation of signal transduction

2.7E-03

GO:0010648

Negative regulation of cell communication

2.7E-03

GO:0023057

Negative regulation of signaling

2.7E-03

GO:0019856

Pyrimidine nucleobase biosynthetic process

2.7E-03

GO:0010224

Response to UV-B

5.0E-03

GO:0019932

Second-messenger-mediated signaling

6.0E-03

GO:0010243

Response to organonitrogen compound

6.1E-03

GO:0006835

Dicarboxylic acid transport

6.3E-03

GO:0009875

Pollen-pistil interaction

6.3E-03

GO:0010200

Response to chitin

6.5E-03

GO:0009695

Jasmonic acid biosynthetic process

7.0E-03

GO:0006206

Pyrimidine nucleobase metabolic process

7.4E-03

GO:0006984

ER-nucleus signaling pathway

8.1E-03

GO:0071324

Cellular response to disaccharide stimulus

8.3E-03

GO:0071329

Cellular response to sucrose stimulus

8.3E-03

GO:0042538

Hyperosmotic salinity response

9.6E-03

GO:0030968

Endoplasmic reticulum unfolded protein response

1.1E-02

GO:0015743

Malate transport

1.2E-02

GO:0034620

Cellular response to unfolded protein

1.3E-02

GO:0035967

Cellular response to topologically incorrect protein

1.3E-02

GO:0010118

Stomatal movement

1.3E-02

GO:0006986

Response to unfolded protein

1.3E-02

GO:0048544

Recognition of pollen

1.5E-02

GO:0008037

Cell recognition

1.6E-02

GO:0009827

Plant-type cell wall modification

1.8E-02

GO:0015740

C4-dicarboxylate transport

1.9E-02