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Table 1 Identification of Differentially Expressed Genes (DEGs)

From: Comparative transcriptome analysis of the interaction between Actinidia chinensis var. chinensis and Pseudomonas syringae pv. actinidiae in absence and presence of acibenzolar-S-methyl

 

Comparison

Total DEGs

Up regulated

Down regulated

DEGs associated with the infection process

HC_vs_I3

2747

1596

1151

HC_vs_I24

272

116

156

HC_vs_I48

341

81

260

DEGs associated with acibenzolar-S-methyl treatment

HC_vs_ASM

819

474

345

DEGs associated with infection in acibenzolar-S-methyl treated plants

I3_vs_ASM.I3

510

323

187

I24_vs_ASM.I24

1374

552

822

I48_vs_ASM.I48

1252

747

505

  1. HC was healthy control plants; I3, I24, I48 were inoculated plants at 3, 24 and 48 h post-inoculation; ASM represented acibenzolar-S-methyltreated healthy plants; ASM.I3, ASM.I24, ASM.I48 were acibenzolar-S-methyltreated plant inoculated at 3, 24 and 48 h post-inoculation (hpi)