Summary | A. simplex s.s | A. pegreffii | Hybrid | Merged |
---|---|---|---|---|
Total transcriptome size | 88,007,524 | 68,071,234 | 50,568,936 | 67,459,080 |
Unigenes (Loci) | 36,645 | 31,988 | 29,656 | -NA- |
Transcripts (isoforms) | 121,907 | 91,541 | 76,848 | 75,380 |
Longest transcript (bp) | 10,774 | 11,724 | 10,798 | 16,240 |
shortest transcript (bp) | 100 | 100 | 100 | 107 |
% transcripts >1Kb | 20.3% | 21.7% | 17.9% | 28.7% |
N50 (bp) | 973 | 1026 | 885 | 1276 |
L50 (bp) | 25,878 | 19,118 | 16,598 | 15,385 |
%A | 30.87% | 30.25% | 30.11% | 30.41% |
%C | 19.60% | 20.03% | 20.36% | 18.64% |
%G | 19.64% | 19.98% | 20.49% | 20.60% |
%T | 29.89% | 29.74% | 29.04% | 29.87% |
%Ns | 0% | 0% | 0% | 0% |