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Table 2 Genetic diversity measurements for nine sub-populations from three chicken breeds

From: Genomic diversity dynamics in conserved chicken populations are revealed by genome-wide SNPs

Population

Ho

He

PN (%)

AR

F ES a

F ROH b

BEC07

0.2250

0.2195

82.41

1.225

0.0567

0.0500

BEC10

0.2281

0.2208

81.64

1.228

0.0748

0.0481

BEC15

0.2211

0.2073

76.06

1.221

0.1043

0.0553

BEC average

0.2247

0.2159

80.04

1.225

0.0789

0.0511

BYC07

0.2223

0.2173

80.95

1.222

0.1820

0.0698

BYC10

0.2189

0.2091

79.11

1.219

0.1978

0.0613

BYC15

0.2095

0.2091

75.83

1.210

0.2233

0.0925

BYC average

0.2169

0.2118

78.63

1.217

0.2010

0.0745

LSC10

0.2290

0.2197

80.55

1.229

0.0748

0.0474

LSC12

0.2376

0.2273

81.70

1.238

0.0867

0.0461

LSC15

0.2379

0.2281

81.66

1.238

0.1043

0.0606

LSC average

0.2348

0.2250

81.30

1.235

0.0886

0.0514

  1. He Expected heterozygosity, Ho Observed heterozygosity, PN Proportion of polymorphic SNPs, AR Allelic richness, FES a, inbreeding coefficient based on pedigree; FROH b, inbreeding coefficient based on runs of homozygosity