From: Genome-scale MicroRNA target prediction through clustering with Dirichlet process mixture model
Datasets | Content |
---|---|
CLASH data [7] | 17,436 interactions on Human kidney cell (HEK293), associated with Ago1 |
iPAR-CLIP data [8] | 10,566 interactions on HEK293, human embryonic stem cell, EBV-infected lymphoblastoid cell lines, and primary effusion lymphoma cell line, associated with Ago1 and Ago2 |
CLEAR-CLIP data [30] | 32,711 interactions on Human hepatoma cell, associated with Ago |
mirTarbase [20] | 11,002 interactions on Human genome, predicted by miRanda; 483 validated interactions by non-sequencing analysis |
RefSeq [42] | 56,000 human transcripts |