Skip to main content

Table 3 Summary of intra- and inter-isolate variations of Puccinia striiformis isolates Pst (93–210) and Psh (93TX-2)

From: Genomic insights into host adaptation between the wheat stripe rust pathogen (Puccinia striiformis f. sp. tritici) and the barley stripe rust pathogen (Puccinia striiformis f. sp. hordei)

Polymorphism

Pst (93–210)

Psh (93TX-2)

Pst (93–210)

Psh (93TX-2)

Pst (93–210)

Psh (93TX-2)

SNPs

 Total SNPs

520,730

629,641

684,747

563,165

 SNP density

6.42 ± 11.80/kb

7.71 ± 12.80/kb

9.16 ± 14.05/kb

7.58 ± 12.68/kb

InDels

 Total InDels

152,392

150,289

159,457

156,529

 InDel density

1.97 ± 4.07/kb

1.93 ± 3.88/kb

2.21 ± 4.07/kb

2.19 ± 4.18/kb