Skip to main content

Table 2 The list of SNPs that are significantly associated with IgG NAb

From: A genome-wide association study for natural antibodies measured in blood of Canadian Holstein cows

No.

SNP ID

BTA:Position

MAF

ASE

FDR Corrected p-value

1

BTA-95285-NO-RS

1:45452593

0.4121

−0.3635

3.93E-02

2

ARS-BFGL-NGS-80731

20:52529599

0.4225

0.358795

1.15E-02

3

ARS-BFGL-NGS-36353

21:56272444

0.3745

0.373862

1.42E-02

4

HAPMAP36811-SCAFFOLD240339_791

21:57920570

0.0753

0.668197

1.16E-02

5

ARS-BFGL-NGS-18270

21:62445122

0.0966

0.669079

1.03E-03

6

ARS-BFGL-NGS-114799

21:66492068

0.4214

−0.44719

6.56E-04

7

ARS-BFGL-NGS-20339

21:67088847

0.3417

−0.37211

1.81E-02

8

ARS-BFGL-NGS-29558

21:67345260

0.2074

−0.52465

6.56E-04

9

ARS-BFGL-NGS-119656

21:67963614

0.1654

0.469889

3.17E-02

10

ARS-BFGL-NGS-21626

21:68105539

0.2091

−0.51097

9.35E-04

11

BTA-03263-RS29011028

21:68356479

0.2298

−0.39036

4.61E-02

12

ARS-BFGL-NGS-86477

21:68399787

0.3504

−0.54776

9.82E-07

13

HAPMAP41289-BTA-53093

21:68751694

0.0464

−0.82127

1.34E-02

14

ARS-BFGL-NGS-39941

21:69279283

0.2102

0.441591

1.25E-02

15

ARS-BFGL-NGS-115062

21:69395154

0.4973

−0.46877

5.27E-05

16

ARS-BFGL-NGS-109976

21:69891992

0.2959

0.422929

3.81E-03

17

ARS-BFGL-NGS-1345

21:69939350

0.4885

−0.36527

1.37E-02

18

ARS-BFGL-NGS-33371

21:69972343

0.4088

−0.56953

8.87E-08

19

ARS-BFGL-NGS-63968

21:70012413

0.0393

1.02312

9.35E-04

20

ARS-BFGL-NGS-10484

21:70050042

0.0486

0.926758

1.03E-03

21

ARS-BFGL-NGS-40895

21:70116946

0.4509

−0.41571

9.13E-04

22

ARS-BFGL-NGS-106472

21:70732448

0.0922

0.67538

1.74E-03

23

BTA-100472-NO-RS

21:70759096

0.185

−0.50167

1.49E-03

  1. BTA Bos taurus autosome, MAF Minor Allele Frequency, ASE Allele Substitution Effect