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Table 2 Cd-regulated DEGs of orthologous transporters in maize and rice roots

From: Comparative analysis of Cd-responsive maize and rice transcriptomes highlights Cd co-modulated orthologs

BinName

 

Maize

  

Rice

 

Plant Orthologous Groups

 

Gene ID

Log2FC

Annotation

Gene ID

log2FC

Annotation

APK_ORTHOMCL

Metal binding, chelation and storage

 

ZM2G085086

2.43

ZmHIPP27, HMAD isoprenylated plant protein

Os04g17100

3.62

heavy metal-associated domain (HMAD), OsHIPP42

MCL4978

 

ZM2G008290

3.75

ZmHIPP35

Os10g30450

0.93

OsHIPP35

MCL1350

 

ZM2G086163

4.51

ZmHIPP36

Os03g05750

7.38

OsHIPP36

MCL16487

ABC transporters and multidrug resistance systems

 

ZM5G874955

5.87

ABC transporter G family member 40

Os01g42380

2.15

ABCG36/OsPDR9, pleiotropic drug resistance protein

MCL2

 

ZM5G892675

5.00

ABC transporter G family member 36

Os01g42410

2.59

ABCG37/OsPDR8

MCL2

 

ZM2G003411

2.64

ABC transporter G family member 39

Os02g11760

3.10

ABCG39/OsPDR7

MCL2

 

ZM2G366146

2.32

ABC transporter G family member 42

Os01g42370

1.68

ABCG35/OsPDR11

MCL2

 

ZM2G143139

2.22

ABC transporter G family member 37

Os08g29570

4.72

ABCG44/OsPDR17

MCL2

 

ZM2G415529

1.27

ABC transporter G family member 43-like

   

MCL2

 

ZM2G391815

1.23

ABC transporter G family member 34

   

MCL2

Divalent cations transporters

 

ZM2G118821

−0.92

ZmIRT1, zinc transporter 10

Os03g46470

−2.58

OsIRT1, Iron-regulated transporter

MCL3982

 

ZM2G045849

−1.05

ZmZIP3, zinc transporter 1

Os05g39540

−1.93

OsZIP9, ZRT/IRT-like protein

MCL386

 

ZM2G015955

−0.94

ZmZIP7, zinc transporter 4

Os06g37010

−1.39

OsZIP10

MCL2136

 

ZM2G047762

−0.81

ZmZIP9, zinc transporter 5

Os05g39560

−1.98

OsZIP5

MCL14115

 

ZM2G144083

−1.83

ATP dependent copper transporter

Os04g46940

−0.99

OsHMA5, heavy metal P-type ATPase

MCL2236

Amino acid transporters

 

ZM2G164814

2.35

amino acid carrier

Os01g66010

1.48

amino acid transporter

MCL399

    

Os05g34980

0.99

amino acid transporter

MCL399

 

ZM2G157168

3.72

amino acid permease 2

Os12g08090

2.73

amino acid transporter

MCL2026

 

ZM2G433162

1.46

amino acid permease 2

Os12g08130

1.65

amino acid transporter

MCL2026

MATE efflux family and other transporters

 

ZM2G031938

1.37

protein DETOXIFICATION 40

Os03g37490

0.99

PEZ1, Phenolic Efflux Transporter

MCL409

 

ZM2G170128

0.92

transparent testa 12 protein

   

MCL409

 

ZM2G151903

1.93

Protein DETOXIFICATION 21

Os12g03260

1.53

MATE efflux family protein

MCL636

 

ZM2G079127

2.00

Protein DETOXIFICATION 21

   

MCL636

 

ZM2G006212

3.31

protein DETOXIFICATION 49

Os02g45380

2.76

MATE efflux family protein

MCL1103

 

ZM2G080992

2.96

protein DETOXIFICATION 49

Os04g48290

1.14

MATE efflux family protein

MCL1103

 

ZM2G135175

2.86

protein DETOXIFICATION 49

   

MCL1103

 

ZM2G119970

5.08

adenine/guanine permease AZG1

Os05g26840

1.05

permease domain

MCL6695

 

ZM2G358791

2.03

adenine/guanine permease AZG2

Os11g24060

1.01

permease domain

MCL7794

 

ZM2G068220

0.80

adenine/guanine permease AZG2

   

MCL7794

  1. Plant orthologous group prefix APK_ORTHOMCL is abbreviated as MCL. Those genes underlined are also Cd-responsive DEGs in previous report [19]