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Table 1 Properties of the Trichoderma genomes and gene distribution

From: Evolution and comparative genomics of the most common Trichoderma species

Clade

Species

Strain

Genome size (Mbp)

Total genes

Complete-ness (%)

Fragmen-ted (%)

Missing (%)

Orthologs and paralogs

Longibrachiatum

T. reesei a

QM6a

32.7

9877

96.9

2.4

0.7

8090

RUT C30

34.2

10877

    

T. longibrachiatum

ATCC18648

31.74

10938

86.3

7.9

5.8

8229

T. citrinoviride

TUCIM 6016

33.2

9737

94.1

3.1

2.8

7834

T. parareesei

CBS125925

32.07

9292

95.3

3.7

1

8328

Harzianum/Virens Clades

T. harzianum

CBS 226.95

40.9

14095

98.1

1.4

0.5

9921

TR257

39.4

13932

97.2

2

0.8

9870

T. afroharzianum

T6776

39.7

11297

95.1

1.8

3.1

9541

T. guizhouense

NJAU4742

38.8

11297

98.3

1.2

0.5

9246

T. virens

Gv29–8

40.52

12427

97.8

1.9

0.3

9795

Trichoderma

T. atroviride

IMI 206040

36.4

11863

97.5

2.1

0.4

9301

T. gamsii

T6085

37.9

10709

94.1

2.1

3.8

8825

T. asperellum

CBS433.97

37.66

12586

97.9

1.4

0.7

9143

T. hamatum

GD12

38.43

10520

98.6

0.7

0.7

9030

  1. a numbers show data (from left to right) obtained in this paper and by Li et al. [27] (if available)