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Table 2 List of selected top 50 significantly differentially expressed genes from gorilla and human fecal RNA-seq

From: Mapping gastrointestinal gene expression patterns in wild primates and humans via fecal RNA-seq

Ensembl Id

baseMean

log2FC

lfcSE

pvalue

padj

Gene symbol

entrez ID

Gene name

ENSG00000167996

11,610.8

−16.95

1.69

1.30E-23

3.81E-20

FTH1

2495

ferritin heavy chain 1

ENSG00000159251

10,736.4

16.84

1.76

1.20E-21

1.75E-18

ACTC1

70

actin, alpha, cardiac muscle 1

ENSG00000183304

61.38

25.02

2.68

9.69E-21

9.46E-18

FAM9A

171,482

family with sequence similarity 9 member A

ENSG00000185201

183.02

26.54

2.96

3.09E-19

2.26E-16

IFITM2

10,581

interferon induced transmembrane protein 2

ENSG00000158470

18,496.9

15.59

1.77

1.18E-18

5.77E-16

B4GALT5

9334

beta-1,4-galactosyltransferase 5

ENSG00000152977

704.66

−26.19

2.97

1.10E-18

5.77E-16

ZIC1

7545

Zic family member 1

ENSG00000235750

3610.92

15.27

1.74

1.76E-18

7.37E-16

KIAA0040

9674

KIAA0040

ENSG00000227877

91.61

25.53

2.96

6.52E-18

2.32E-15

MRLN

100,507,027

myoregulin

ENSG00000089356

85.74

25.50

2.96

7.12E-18

2.32E-15

FXYD3

5349

FXYD domain containing ion transport regulator 3

ENSG00000280831

72.47

25.28

2.96

1.38E-17

4.04E-15

RPS25

6230

ribosomal protein S25

ENSG00000169605

64.76

24.87

2.96

4.44E-17

1.18E-14

GKN1

56,287

gastrokine 1

ENSG00000164405

52.34

24.83

2.96

5.02E-17

1.23E-14

UQCRQ

27,089

ubiquinol-cytochrome c reductase complex III subunit VII

ENSG00000126709

45.85

24.65

2.96

8.44E-17

1.72E-14

IFI6

2537

interferon alpha inducible protein 6

ENSG00000233927

45.61

24.64

2.96

8.67E-17

1.72E-14

RPS28

6234

ribosomal protein S28

ENSG00000107223

53.30

24.63

2.96

8.81E-17

1.72E-14

EDF1

8721

endothelial differentiation related factor 1

ENSG00000144233

39.76

24.44

2.96

1.53E-16

2.68E-14

AMMECR1L

83,607

AMMECR1 like

ENSG00000173467

39.14

24.43

2.96

1.56E-16

2.68E-14

AGR3

155,465

anterior gradient 3, protein disulphide isomerase family member

ENSG00000129559

38.07

24.39

2.96

1.77E-16

2.77E-14

NEDD8

4738

neural precursor cell expressed, developmentally down-regulated 8

ENSG00000106153

40.39

24.38

2.96

1.80E-16

2.77E-14

CHCHD2

51,142

coiled-coil-helix-coiled-coil-helix domain containing 2

ENSG00000169189

36.70

24.35

2.96

2.00E-16

2.93E-14

NSMCE1

197,370

NSE1 homolog, SMC5-SMC6 complex component

ENSG00000163541

32.88

24.20

2.96

3.04E-16

4.24E-14

SUCLG1

8802

succinate-CoA ligase alpha subunit

ENSG00000198643

32.08

24.14

2.96

3.59E-16

4.78E-14

FAM3D

131,177

family with sequence similarity 3 member D

ENSG00000275903

29.48

24.03

2.96

4.88E-16

6.22E-14

PSMB3

5691

proteasome subunit beta 3

ENSG00000177697

36.53

23.99

2.96

5.34E-16

6.26E-14

CD151

977

CD151 molecule (Raph blood group)

ENSG00000163959

26.61

23.91

2.96

6.79E-16

7.65E-14

SLC51A

200,931

solute carrier family 51 alpha subunit

ENSG00000196914

49.35

−23.95

2.97

7.09E-16

7.69E-14

ARHGEF12

23,365

Rho guanine nucleotide exchange factor 12

ENSG00000136167

26.11

23.87

2.96

7.58E-16

7.86E-14

LCP1

3936

lymphocyte cytosolic protein 1

ENSG00000241468

25.70

23.86

2.96

7.78E-16

7.86E-14

ATP5MF

9551

ATP synthase membrane subunit f

ENSG00000182718

24.11

23.77

2.96

1.00E-15

9.77E-14

ANXA2

302

annexin A2

ENSG00000164266

38.51

23.73

2.96

1.12E-15

1.06E-13

SPINK1

6690

serine peptidase inhibitor, Kazal type 1

ENSG00000156467

22.80

23.69

2.96

1.24E-15

1.14E-13

UQCRB

7381

ubiquinol-cytochrome c reductase binding protein

ENSG00000140319

21.51

23.60

2.96

1.58E-15

1.40E-13

SRP14

6727

signal recognition particle 14

ENSG00000118972

1630.18

−14.12

1.77

1.62E-15

1.40E-13

FGF23

8074

fibroblast growth factor 23

ENSG00000110700

20.79

23.57

2.96

1.72E-15

1.44E-13

RPS13

6207

ribosomal protein S13

ENSG00000124172

18.93

23.45

2.96

2.43E-15

1.97E-13

ATP5F1E

514

ATP synthase F1 subunit epsilon

ENSG00000105404

18.29

23.39

2.96

2.81E-15

2.22E-13

RABAC1

10,567

Rab acceptor 1

ENSG00000143226

17.72

23.36

2.96

3.10E-15

2.33E-13

FCGR2A

2212

Fc fragment of IgG receptor IIa

ENSG00000197956

886.17

13.24

1.68

3.08E-15

2.33E-13

S100A6

6277

S100 calcium binding protein A6

ENSG00000116663

16.94

23.29

2.96

3.68E-15

2.70E-13

FBXO6

26,270

F-box protein 6

ENSG00000105379

16.11

23.22

2.96

4.51E-15

3.22E-13

ETFB

2109

electron transfer flavoprotein beta subunit

ENSG00000246705

15.06

23.13

2.96

5.68E-15

3.96E-13

H2AFJ

55,766

H2A histone family member J

ENSG00000206291

15.77

22.97

2.96

8.90E-15

5.79E-13

HLA-DPA1

3113

major histocompatibility complex, class II, DP alpha 1

ENSG00000103187

12.75

22.91

2.96

1.04E-14

6.51E-13

COTL1

23,406

coactosin like F-actin binding protein 1

ENSG00000117616

13.04

22.91

2.96

1.04E-14

6.51E-13

RSRP1

57,035

arginine and serine rich protein 1

ENSG00000162909

12.50

22.79

2.96

1.41E-14

8.59E-13

CAPN2

824

calpain 2

ENSG00000148180

19.65

−22.67

2.97

2.24E-14

1.34E-12

GSN

2934

gelsolin

ENSG00000165030

17.54

−22.51

2.97

3.41E-14

1.96E-12

NFIL3

4783

nuclear factor, interleukin 3 regulated

ENSG00000165704

16.69

−22.44

2.97

4.10E-14

2.31E-12

HPRT1

3251

hypoxanthine phosphoribosyltransferase 1

ENSG00000119431

15.72

−22.36

2.97

5.06E-14

2.80E-12

HDHD3

81,932

haloacid dehalogenase like hydrolase domain containing 3

ENSG00000116176

13.05

22.26

2.96

5.70E-14

3.09E-12

TPSG1

25,823

tryptase gamma 1

  1. log2FC: log2FoldChange (Gorilla/human)
  2. lfcSE: logfoldchangeStandard Error
  3. padj: Adjusted p value