Table 1 Genomic features of Pectobacterium carotovorum subsp. brasiliense SX309 and other Pectobacterium spp
Features | SX309 | BC1 | BAZ12 | PCC21 | BC S7 | SCRI1043 | SCC3193 | CFBP3304 | RNS08.42.1A |
|---|---|---|---|---|---|---|---|---|---|
Size (bp) | 4,966,299 | 4,920,350 | 4,924,809 | 4,842,771 | 4,933,575 | 5,064,019 | 5,164,411 | 5,043,228 | 5,030,841 |
G+C content (%) | 52.18 | 51.80 | 52.00 | 52.18 | 51.80 | 51.00 | 50.40 | 50.60 | 50.40 |
Replicons | One chromosome | One chromosome | One chromosome | One chromosome | One chromosome | One chromosome | One chromosome | One chromosome | One chromosome |
Total genes | 4,455 | 4,472 | 4,476 | 4,340 | 4,340 | 4,615 | 4,821 | 4,579 | 4,564 |
Predicted no. of CDS | 4,351 | 4,267 | 4,251 | 4,263 | 3,855 | 4,381 | 4,449 | 4,472 | 4,457 |
Ribosomal RNA | 22 | 22 | 22 | 22 | 22 | 22 | 22 | 22 | 22 |
Transfer RNA | 76 | 77 | 76 | 7 | 77 | 77 | 77 | 77 | 77 |
Other RNA | 6 | 9 | 7 | 6 | 1 | 10 | 7 | 8 | 8 |
Pseudogene | 99 | 97 | 120 | 121 | 385 | 125 | 266 | 184 | 62 |
GenBank sequence | CP020350.1 | CP009769.1 | CP024780.1 | CP003776.1 | CP009678.1 | BX950851.1 | CP003415.1 | CP015750.1 | CP015749.1 |