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Table 2 Functional domains of TaHsfs

From: Genome-wide identification, phylogenetic and expression analysis of the heat shock transcription factor family in bread wheat (Triticum aestivum L.)

Names

Protein type (A-B-C)

DBD

HR-A/B

NLS

NES

AHA

TaHsf1

A1a

38–128

163–227

(245)RRIVAANKKRR

(508)LTEQMGLL

AHA2(464)DSFWEQFLCA

TaHsf2

A1a

1–73

109–173

(191)RRIVAANKKRR

(458)LTEQMGLL

AHA2(414)DSFWEQFLCA

TaHsf3

A1a

1–91

125–189

(207)RRIVAANKKRR

(474)LTEQMGLL

AHA2(430)DSFWEQFLCA

TaHsf4

A2a

38–128

143–207

(223)RKELEDAISNKRRRR

nd

AHA1(313)DDFWEDLL

TaHsf5

A2a

40–130

145–209

(225)RKELEDAISNKRRRR

nd

AHA1(315)DDFWEDLL

TaHsf6

A2a

45–135

150–214

(230)RKELEDAISNKRRRR

nd

AHA(320)DDFWEDLL

TaHsf7

A2b

43–133

149–213

(229)RKELHDAISKKRRRR

(400)KMGYL

AHA1(370)DNFWEELL

TaHsf8

A2b

44–134

150–214

(230)SKELHDAISKKRRRR

(392)KMGYF

AHA1(362)DNFWEGLL

TaHsf9

A2b

43–133

149–213

(229)RKELHDAISKKRRRR

(399)KMGYL

AHA1(369)DNFWEELL

TaHsf10

A2b

42–132

148–212

(228)RKELHDAMSKKRRRS

nd

nd

TaHsf11

A2b

41–131

147–211

(227)RKELHDAMSKKRRRS

nd

AHA1(353)DDFWEELM

TaHsf12

A2e

66–156

178–242

(260)RKELAEALLSKKRGR

nd

AHA1(314)ESFWKELL

TaHsf13

A2e

66–156

180–244

(262)RKELAEALLSKKRGR

nd

AHA1(320)ESFWKELL

TaHsf14

A3

49–139

175–221

(248)RVKRKFLKHV

nd

nd

TaHsf15

A3

84–174

210–256

(283)RVKRKFLKHV

nd

nd

TaHsf16

A3

80–170

206–252

(279)RVKRKFLKHV

nd

nd

TaHsf17

A3

81–171

207–253

(280)RVKRKFLKHV

nd

nd

TaHsf18

A4a

13–103

126–183

(198)KKRR

(419)MTEKLGHL

AHA1(244)LNSLENFFKE AHA2(370)DGFWQQFLTE

TaHsf19

A4a

13–103

126–183

(198)KKRR

(428)MTEKLGHL

AHA1(244)LNSLENFFKE AHA2(379)DGFWQQFLTE

TaHsf20

A4a

13–103

126–183

(198)KKRR

(420)MTKKLGHL

AHA1(244)LNSLENFFKE AHA2(370)DGFWQQFLTE

TaHsf21

A4d

25–115

138–195

(220)KKRR

(430)ITQQMGHL

AHA1(267)LVSMEKLVQR AHA2(386)DLFWERFLTD

TaHsf22

A4d

23–113

136–193

(219)KKRR

(432)ITEQMGHL

AHA1(267)LVSMEKLVRR AHA2(388)DLFWERFLTD

TaHsf23

A4d

23–113

136–193

(218)KKRR

(429)ITEQMGHL

AHA1(270)LVSMEKLVQR AHA2(385)DLFWERFLTD

TaHsf24

A5

20–111

131–188

(199)KMAEASSMFADALHKK

nd

(414)DNFWEQFLTE

TaHsf25

A5

20–111

131–188

(199)KMAEASSMFADALHKK

nd

(414)DNFWEQFLTE

TaHsf26

A5

20–111

131–188

(199)KMAEASSMFADALHKK

nd

(414)DNFWEQFLTE

TaHsf27

A6a

52–142

159–223

(238)KRKELEDAISKKRRR

(352)IDELGQQLGYL

(322)SDFWAELFSD

TaHsf28

A6a

48–138

155–219

(234)KRKELEDAISKKRRR

(348)IDELAQQLGYL

(318)NDFWAELFSD

TaHsf29

A6a

54–144

161–225

(240)KRKELEDAISKKRRR

(354)IDELAQQLGYL

(324)NDFWAELFSD

TaHsf30

A6b

46–136

153–217

(232)KLKDLEDGYPTKRRR

nd

(311)DDFWEELLSE

TaHsf31

A6b

46–136

153–217

(232)KLKDLEDGYPTKRRR

nd

(311)DDFWEELLSE

TaHsf32

A6b

46–136

153–217

(232)KLKDLEDAYSNKRRR

nd

(311)DDFWEELLSE

TaHsf33

A7b

47–138

150–175

nd

nd

(246)TDMIWYELL

TaHsf34

A7b

49–139

173–223

nd

nd

(298)TDMIWYELL

TaHsf35

A7b

49–139

173–223

nd

nd

(298)TDMIWYELL

TaHsf36

A8

37–127

173–230

nd

nd

nd

TaHsf37

A8

37–127

173–230

nd

nd

nd

TaHsf38

A8

37–127

173–230

nd

nd

nd

TaHsf39

B1

27–117

172–209

nd

nd

nd

TaHsf40

B1

30–120

174–211

nd

nd

nd

TaHsf41

B1

30–120

174–211

nd

nd

nd

TaHsf42

B2a

13–103

157–193

(223)KRSRE

nd

nd

TaHsf43

B2a

26–116

170–206

nd

nd

nd

TaHsf44

B2c

42–132

215–251

(321)KRARD

nd

nd

TaHsf45

B2c

176–266

349–385

(455)KRARD

nd

nd

TaHsf46

B2c

42–132

215–251

(321)KRARD

nd

nd

TaHsf47

B2d

32–122

192–228

(300)KRMRH

nd

nd

TaHsf48

B2d

32–122

192–228

(300)KRMRH

nd

nd

TaHsf49

B2d

32–122

192–228

(293)KRMRH

nd

nd

TaHsf50

B4b

40–130

201–237

(299)KKKR

nd

nd

TaHsf51

B4b

39–129

200–236

(299)KKKR

nd

nd

TaHsf52

B4c

26–117

207–243

(336)PVGA

(362)LALENDDL

nd

TaHsf53

B4c

26–117

207–243

(336)PVGA

(362)LALESDDL

nd

TaHsf54

B4c

26–117

207–243

(336)PVGA

(362)LALESDDL

nd

TaHsf55

C1a

21–111

121–164

nd

nd

nd

TaHsf56

C1a

1–84

121–171

nd

nd

nd

TaHsf57

C1a

21–111

154–197

nd

nd

nd

TaHsf58

C1a

25–115

159–202

nd

nd

nd

TaHsf59

C1a

25–115

159–202

nd

nd

nd

TaHsf60

C1a

21–111

149–192

nd

nd

nd

TaHsf61

C1b

19–109

126–169

nd

nd

nd

TaHsf62

C1b

19–109

131–174

nd

nd

nd

TaHsf63

C1b

19–109

131–174

nd

nd

nd

TaHsf64

C2a

1–75

97–140

(168)KRPR

  

TaHsf65

C2a

24–114

134–177

(202)KRPR

nd

nd

TaHsf66

C2a

19–109

132–175

(203)KRPR

nd

nd

TaHsf67

C2a

12–102

124–167

(195)QRPR

nd

nd

TaHsf68

C2a

21–111

135–178

(206)KRPR

nd

nd

TaHsf69

C2a

20–110

132–175

(203)KKPR

nd

nd

TaHsf70

C2a

24–114

135–178

(205)KRPR

nd

nd

TaHsf71

C2a

23–113

135–178

(206)KRRR

nd

nd

TaHsf72

C2a

24–114

141–184

(211)KRPR

nd

nd

TaHsf73

C2a

30–120

143–186

(207)NRPR

nd

nd

TaHsf74

C2a

1–84

106–149

(177)KRPR

nd

nd

TaHsf75

C2a

23–113

132–175

(198)KRLR

nd

nd

TaHsf76

C2b

15–105

132–175

(204)KRAR

nd

nd

TaHsf77

C2b

1–84

97–153

nd

nd

nd

TaHsf78

C2b

13–103

129–172

(201)KRAR

nd

nd

  1. DBD DND-binding domain, HR-A/B OD (oligomerisation domain), heptad pattern of hydrophobic amino acid residues; NLS: Nuclear localization signal, NES Nuclear export signal. AHA Activator motifs, aromatic (W, F, Y), larger hydrophobic (L, I, V) and acidic (E, D) amino acid residues; Numbers in brackets reveals the position of the first amino acid present in the putative NLS, NES, and AHA in the C-terminal; nd: no domains detectable by sequence similarity