From: Genomic variation between PRSV resistant transgenic SunUp and its progenitor cultivar Sunset
SNP pattern | Â | Homo SNPs | Hetero SNPs | Total SNPs |
---|---|---|---|---|
Transition | A/G | 5315 | 45,067 | 50,382 |
T/C | 5768 | 44,871 | 50,639 | |
G/A | 4701 | 47,543 | 52,244 | |
C/T | 4908 | 47,160 | 52,068 | |
total(Ts) | 20,692 | 184,641 | 205,333 | |
Transversion | A/C | 2329 | 12,114 | 14,443 |
A/T | 2327 | 11,999 | 14,326 | |
T/A | 2310 | 12,199 | 14,509 | |
T/G | 2274 | 12,193 | 14,467 | |
G/C | 2509 | 6589 | 9098 | |
G/T | 3020 | 11,576 | 14,596 | |
C/A | 3104 | 11,522 | 14,626 | |
C/G | 2306 | 6660 | 8966 | |
total(Tv) | 20,179 | 84,852 | 105,031 | |
Ts/Tv | 1.03 | 2.18 | 1.95 |