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Table 2 BLAST analysis of non-redundant unigenes sequenced for Sophora alopecuroides, against public databases

From: De novo transcriptome sequencing and analysis of salt-, alkali-, and drought-responsive genes in Sophora alopecuroides

 

Number of Unigenes

Percentage (%)

Annotated in Nr

357,522

39.6

Annotated in Nt

214,419

23.75

Annotated in KO

157,394

17.43

Annotated in Swiss-Prot

293,553

32.51

Annotated in PFAM

356,271

39.46

Annotated in GO

366,814

40.63

Annotated in KOG

178,137

19.73

Annotated in all Databases

47,161

5.22

Annotated in at least one Database

545,615

60.43

Total Unigenes

902,812

100

  1. Nr NCBI non-redundant protein Sequences, Nt NCBI nucleotide Sequences, Pfam Protein family, KOG/COG KOG: euKaryotic Ortholog Groups; COG: Clusters of Orthologous Groups of proteins, Swiss-Prot A manually annotated and reviewed protein sequence database, KEGG Kyoto Encyclopedia of Genes and Genomes, and GO Gene Ontology