Table 4 Expression trend between miRNA and its target genes
From: Identification of miRNA-eQTLs in maize mature leaf by GWAS
Associated miRNA | SNP type | miRNA expression level | p-value | Target gene | Target gene expression level | p-value | Target region | Trend |
|---|---|---|---|---|---|---|---|---|
miR156k-5p | A | low | 7.1e-09 | sbp29 | high | 0.018 | 3’UTR | Negative |
G | high | low | ||||||
miR390a-5p | G | high | 6.3e-0.7 | GRMZM5G806469 | low | 0.088 | 3’UTR | Negative |
T | low | high | ||||||
miR159a-3p | A | low | 1.1e-0.5 | myb122 | low | 0.05 | CDS | Positive |
C | high | high | ||||||
miR396e-5p | C | high | 0.00046 | GRMZM2G478709 | high | 0.026 | CDS | Positive |
T | low | low | ||||||
grftf9 | high | 0.024 | ||||||
low | ||||||||
grf5 | high | 0.01 | ||||||
low |