Genomic differences between the new Fusarium oxysporum f. sp. apii (Foa) race 4 on celery, the less virulent Foa races 2 and 3, and the avirulent on celery f. sp. coriandrii

Table 2 Statistics for the assembled Fusarium oxysporum f. sp. apii and f. sp. coriandrii genomes

F. oxysporum forma specialis / race	Isolate ID	No. contigs / scaffolds	Genome size, Mb	Maximum contig size, Mb	N₅₀, Mb	Average PacBio RSII coverage	Illumina coverage (& technology^a)	GenBank Assembly No.
apii race 4	Foa274.AC	74	67.4	7.0	4.4	70	120 (H), 35 (M)	JAAOOQ000000000
apii race 3	FoaR3^b	76	65.4	7.0	4.0	72	107 (H)	JAAOOP000000000
apii race 2	Foa207.A	50	64.8	6.5	3.5	58	95 (H)	JAAOOO000000000
coriandrii	Foci3–2	50	65.5	6.7	5.0	52	329 (N)	JAAOON000000000
coriandrii	FociGL306	51	65.1	6.8	5.0	50	273 (N)	JAAOOM000000000
lycopersici^c	4287^d	114	61.4	4.4	2.0	NA^e	NA	GCA_000149955.2

^aPaired-end reads were from ‘H’ (Hiseq 4000, 150 bp), ‘N’ (Novaseq, 150 bp), and/or ‘M’ (MiSeq, 250 bp)
^bSynonym, NRRL 38295
^cUsed here as a reference genome [4, 16]
^dSynonym, NRRL 34936
^eNA Not applicable

ISSN: 1471-2164