Fig. 2

Exon binding statistics of eCLIP datasets and prediction results for different sequence contexts. a Distribution of exonic site ratios for 223 eCLIP datasets over four percentage ranges. For each range, the percentage (number) of sets with ratios falling into this range is given. b Correlation plot of exonic site ratios for RBPs present in two cell lines (HepG2 and K562). c Site score distributions for all exonic sites and exonic sites that form pairs by being located at adjacent exon borders. log₂ fold change values of the sites determined by CLIPper were taken as site scores. Only pair sites with a distance of <10 nt to exon borders were considered. d Average classification accuracies over 6 eCLIP datasets for 3 RBP binding site prediction methods, comparing genome and transcript context