Table 1 Software requirements
From: Rapid single cell evaluation of human disease and disorder targets using REVEAL: SingleCell™
Software | Version | URL |
|---|---|---|
Linux | CentOS 7.5 / Ubuntu 14.04 | |
SciDB | 19.11.5 | |
R | 3.6 | https://www.r-project.org |
R packages | ||
- Seurat | 3.1.x | https://satijalab.org/seurat/ |
- SciDBR | 2.0.2 | |
- revealgenomics | 0.6 | private github |
- revealsc | 0.1.0 | private github |
Python | 3.7.6 | |
Python REST API | 1.1.2 | |