Cluster | Model | np a | Ln L | Estimates of parameters (ω2) | LRT P-value | Positive selected sites b | |
---|---|---|---|---|---|---|---|
Background branch | Foreground branch | ||||||
Not required | One-ratio | 183 | − 135,266.4315 | – | – | 0.000000000* | Not Allowed |
Free-ratio | 363 | −134,256.0879 | – | – | Not Allowed | ||
Type I | Model A | 186 | −132,447.573101 | 0.03780 | 999.00000 | 0.000000002* | 1 |
Model A-null | 185 | −132,465.522435 | 1 | – | Not Allowed | ||
Type II | Model A | 186 | −132,461.505672 | 0.03773 | 26.50916 | 0.005794019* | 14 |
Model A-null | 185 | −132,465.312309 | 1 | – | Not Allowed | ||
Type Ia c | Model A | 118 | −66,571.582278 | 0.03457 | 1.00000 | 0.000000000* | None |
Model A-null | 117 | −67,324.741260 | 1 | – |  | Not Allowed |