Fig. 3

Identification and characterization of differentially expressed lncRNAs (DELs) between GLY and CK samples. a expression levels of lncRNA on 12 chromosomes of rice. Each circle represents one sample and corresponds to CK 1/2/3 and GLY 1/2/3 samples from the outer to inner. b the location of lncRNA types on the 12 chromosomes. Each circle represents a type of lncRNA and corresponds to “i”, “j”, “o”, “u”, and “x” from the outer to inner. “i”, transfrag falling entirely within a reference intron; “j”, potentially novel isoform; “o”, generic exonic overlap with a reference transcript; “u”, intergenic transcript; “x”, exonic overlap with a reference to the opposite strand. c the number of up-r and down-regulated DELs. d Volcano Plot of DELs. e part of the significantly enriched GO terms for the target genes of DELs. f part of the significantly enriched KEGG pathways for the target genes of DELs