Table 3 The top-10 differentially expressed genes
From: A large-scale comparative study of isoform expressions measured on four platforms
NanoString | RNA-seq | Microarray | |||
|---|---|---|---|---|---|
Gene name | p-value | Gene name | p-value | Gene name | p-value |
MYB** | 7.176e-06 | LIFR* | 3.813e-05 | MYB** | 1.132e-05 |
LIFR* | 1.667e-04 | MYB** | 6.103e-05 | PRDM16 | 2.846e-03 |
ATRX | 8.292e-04 | PRF1 | 1.359e-04 | SLC34A2 | 3.766e-03 |
SMARCA4 | 3.455e-03 | SLC34A2* | 5.697e-04 | EML4* | 4.375e-03 |
KLK2 | 8.929e-03 | ZNF331 | 8.192e-04 | HNRNPA2B1 | 4.783e-03 |
ETV4* | 0.01022 | WWTR1 | 2.557e-04 | SYK | 5.649e-03 |
EWSR1* | 0.01138 | EML4* | 3.915e-03 | EWSR1* | 5.877e-03 |
MSI2 | 0.01167 | ETV4* | 7.149e-03 | BCL6* | 8.001e-03 |
SRSF2 | 0.01218 | TFG | 8.614e-03 | NONO | 8.039e-03 |
TCF3 | 0.01561 | BCL6* | 9.211e-03 | GPC3 | 8.258e-03 |