Skip to main content
Fig. 2 | BMC Genomics

Fig. 2

From: Whole-genome sequencing of Puccinia striiformis f. sp. tritici mutant isolates identifies avirulence gene candidates

Fig. 2

Genome-wide identification of variants (SNPs and/or Indels), variants densities, distribution of secreted proteins (SPs) and effector candidates from primary assembled scaffolds. The grey bars in the outer layer are the scaffolds of the reference genome, and each axis indicates the genome size of 150 Kb. The first layer in red and second layer in yellow indicate SNP and Indel densities throughout the genome, respectively. Each axis represents 1000 SNPs or Indels per Mb. The third layer in green and the fourth layer in grey exhibits densities if deleterious SNPs and Indel in the scaffolds. Each axis shows 70 SNPs or Indels per Mb. The fifth layer in purple displayed the distribution of SPs in the genome, and each axis indicates 4 SPs. The black dots in the inner layer represent the effector candidates distributed in the scaffolds

Back to article page