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Table 1 Statistics of Paspalum notatum assemblies

From: A study of the heterochronic sense/antisense RNA representation in florets of sexual and apomictic Paspalum notatum

Statistics

Assemblies

de novo with Roche 454/FLX + as guiding reference

de novo without reference

GTAa

Sex

Apo

Sex

Apo

All

Number of contigs

80,177

79,040

100,114

103,699

199,074

%GC

50.32

49.82

48.60

48.17

48.73

Median contig length

781

791

980

903

897

Average contig

1012.51

1023.35

1285.99

1186.29

1182.31

N50

1199

1218

1696

1528

1508

Number of contigs

81,179,923

80,885,743

128,745,833

123,016,839

235,450,926

  1. aGlobal transcriptome assembly