Statistics | Assemblies | ||||
---|---|---|---|---|---|
de novo with Roche 454/FLX + as guiding reference | de novo without reference | GTAa | |||
Sex | Apo | Sex | Apo | All | |
Number of contigs | 80,177 | 79,040 | 100,114 | 103,699 | 199,074 |
%GC | 50.32 | 49.82 | 48.60 | 48.17 | 48.73 |
Median contig length | 781 | 791 | 980 | 903 | 897 |
Average contig | 1012.51 | 1023.35 | 1285.99 | 1186.29 | 1182.31 |
N50 | 1199 | 1218 | 1696 | 1528 | 1508 |
Number of contigs | 81,179,923 | 80,885,743 | 128,745,833 | 123,016,839 | 235,450,926 |