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Table 2 Enriched GO terms, transcription factors, and transcriptional regulators in the six clusters in Fig. 3. See Supplemental Figures 6 and 7 for enriched GO terms and TF/TRs in all 28 clusters obtained through K-means clustering, respectively

From: Genome-wide analysis of spatiotemporal expression patterns during rice leaf development

Cluster

Enriched GO terms

TF/TRs

Cluster1

regulation of transcription, p = 4.8e-07

OSH1/6/15/71 (ClassI KNOX), OsNAM/OsCUC3, OsPLT2/3/4/5/6 (BBM clade PLETHORA), OsTB1

Cluster2

microtubule-based movement, p = 8.6e-05

OsPLT1/7/8/9 (ANT clade PLETHORA), OsGRF1/6/7/9/10, OsGIF1/MKB3

Cluster7

main pathways of carbohydrate metabolism, p = 3.7e-05

OsBOP1/2/3

Cluster9

response to oxidative stress, p = 4.2e-07

 

Cluster12

photosynthesis, p = 7.9e-21

OsBBX8/10/12/17 (C2C2-CO-like), OsPIL12/13 (PIF)

carbon utilization by fixation of carbon dioxide, p = 8.5e-10

electron transport, p = 3.3e-07

Cluster15

protein amino acid phosphorylation, p = 6.2e-05

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