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Table 2 Illumina-sequencing data analysis results

From: Comparative transcriptome analysis of the newly discovered insect vector of the pine wood nematode in China, revealing putative genes related to host plant adaptation

ID

Read number

Base number

GC content (%)

Q30 (%)

Uniquely mapped reads (%)

Reads mapped to multiple loci (%)

Reads mapped to many loci (%)

Pk1

19,908,903

5,943,030,832

41.98

93.18

36.57

42.86

6.13

Pk2

20,814,420

6,198,988,604

42.01

93.49

35.25

44.10

7.28

Pk3

19,898,375

5,936,828,046

42.02

93.59

35.06

43.17

7.80

Pt1

20,331,901

6,064,964,864

42.17

93.38

37.87

42.08

6.29

Pt2

21,214,464

6,338,924,668

42.65

93.29

35.45

43.17

8.99

Pt3

21,507,511

6,426,164,508

42.49

93.30

38.79

41.75

6.28

  1. Q30: proportion of nucleotides with quality value larger than 30 in reads. This means that the base call accuracy (i.e., the probability of a correct base call) is 99.9%