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Fig. 2 | BMC Genomics

Fig. 2

From: The molecular signatures of compatible and incompatible pollination in Arabidopsis

Fig. 2

Quality check of SNP-based RNA-seq analysis. a Estimated proportions of reads allocated to each tissue (31% pollen, 69% stigma) including reads without SNP (15%) that were equally distributed between pollen and stigma (shaded green, 7.5% + shaded purple, 7.5%). b Hexbin plot to visualize distribution of gene expression in stigma (nFPKM stigma) and pollen (nFPKM pollen) at C0. Gene count per hexagon is represented using a color gradient from light grey to orange. Genes without SNP are plotted outside the graph based on their stigma expression (nFPKM stigma)

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