Immune-related genes of the larval Holotrichia parallela in response to entomopathogenic nematodes Heterorhabditis beicherriana LF

Table 1 Summary statistics of transcriptomes

Summary	Hp-CK1	Hp-LF1	Hp-CK3	Hp-LF3
Raw reads number	47,126,795	45,510,292	45,690,800	46,603,740
Raw bases number	7,049,508,850	6,826,543,800	6,816,176,000	7,018,329,600
Clean reads number	46,156,622	44,287,283	44,894,961	45,457,525
Clean bases number	6,885,817,500	6,643,092,450	6,847,377,850	6,818,628,750
Clean Q30 bases rate (%)	95.13	94.92	95.58	95.50
Percen GC of trinity/ unigenes (%)	35.77/35.28	35.98/35.45	35.47/35.34	35.85/35.42
Count of trinity/ unigenes	156,263/70976	175,496/89427	167,584/79571	176,586/85741
Mean length of trinity/ unigenes	890.87/771.14	928.46/756.53	945.18/799.56	899.75/786.42
N50 of trinity/ unigenes	1542/1200	1598/1495	1613/1299	1687/1428

Note: Hp: Holotrichia parallela; LF1: postexposure to H. beicherriana LF for 24 h; LF3: postexposure to H. beicherriana LF for 72 h. The data are presented as two biological replicates. Clean Q30 bases rate is identified as the proportion of bases with a mass value greater than 30 (error rate less than 0.1%) in the total sequence after filtration. N50 is identified as the sequence length of the shorted contig at 50% of the total genome length

ISSN: 1471-2164