Post-diapause transcriptomic restarts: insight from a high-latitude copepod

BMC Genomics

Table 1 Summary of differential gene expression analysis

	DEGs
	Total	Up-regulated	Down-regulated
Generalized linear model (GLM)	14608
Likelihood ratio tests
T₀ vs T_1hr	883	502	381
T₀ vs T_12hr	2523	2026	497
T₀ vs T_24hr	3346	2524	822
T₀ vs T_36hr	3633	2646	987
T₀ vs T_7d	2798	1907	891
T₀ vs T_14d	4874	2678	2106

Differentially expressed genes (DEGs) were identified using a general linear model (GLM) followed by likelihood ratio tests (FDR; p-value ≤0.05) between T₀ females and females from T_1hr, T_12hr, T_24hr, T_36hr, T_7d and T_14d time points. For each pairwise likelihood test, the number of total DEGs, up- and down-regulated is listed. The pairwise comparisons between other samples are shown in Table S1

ISSN: 1471-2164