Table 2 BUSCO completeness percentage scores based on the vertebrata database for unfiltered and filtered transcriptome assemblies for multiple tissue types collected from four marine turtle species
From: Species and population specific gene expression in blood transcriptomes of marine turtles
| Â | Loggerhead - blood | Hawksbill - blood | Green turtle - blood | Leatherback turtle - blood | Leatherback - brain | Leatherback - lung | Leatherback - ovary | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
raw | filtered | raw | filtered | raw | filtered | raw | filtered | raw | filtered | raw | filtered | raw | filtered | |
Total Complete BUSCOs | 76.7 | 72.8 | 81.1 | 80.7 | 83.7 | 83.7 | 84.9 | 85 | 90.6 | 86.3 | 89.5 | 86.4 | 88.9 | 89 |
Single-copy complete BUSCOs | 37.3 | 50.9 | 33.9 | 46.6 | 31.2 | 43.4 | 32.8 | 45.4 | 40.9 | 57.2 | 39.7 | 55.5 | 37.2 | 57.5 |
Duplicated Complete BUSCOs | 39.4 | 21.9 | 47.2 | 34.1 | 52.5 | 40.3 | 52.1 | 39.6 | 49.7 | 29.1 | 49.8 | 30.9 | 51.7 | 31.5 |
Fragmented BUSCOs | 6.3 | 7.1 | 5.5 | 5.6 | 5.4 | 5.5 | 4.5 | 4.2 | 3.1 | 4.1 | 4.1 | 5 | 3.9 | 3.7 |
Missing BUSCOs | 17 | 20.1 | 13.4 | 13.7 | 10.9 | 10.8 | 10.6 | 10.8 | 6.3 | 9.6 | 6.4 | 8.6 | 7.2 | 7.3 |