Fig. 2

DEGs comparisons between sample types. a Number of DEGs compared between two sample types (i.e., In1h vs. CK1h, In1h vs. Aa1h, In12h vs. CK12h, In12h vs. Aa12h, In24h vs. CK24h, and In24h vs. Aa24h). DEGs are shown in red (up-regulated) and blue (down-regulated); b Venn diagram representation of unique and shared DEGs between the ‘In’ and ‘CK’ sample series, at the tested time points; c Venn diagram representation of unique and shared DEGs between the ‘In’ and ‘Aa’ sample series, at the tested time points; d GO functional enrichment analysis of chrysanthemum DEGs; e GO functional enrichment analysis of A. alternata DEGs