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Table 3 Properties of DEGs encoding pathogenesis-related proteins

From: RNA sequencing reveals transcriptomic changes in tobacco (Nicotiana tabacum) following NtCPS2 knockdown

Gene name

Gene ID

log2FC

Protein properties

PRB1

Nitab4.5_0003771g0010

4.52

Pathogenesis-related protein 1A

OSM34

Nitab4.5_0004097g0050

3.76

PREDICTED: pathogenesis-related protein R minor form

PRB1

Nitab4.5_0014031g0010

3.51

PREDICTED: pathogenesis-related protein 1B-like

–

Nitab4.5_0006088g0020

3.46

PREDICTED: pathogenesis-related protein PR-4B

–

Nitab4.5_0018960g0010

3.35

PREDICTED: pathogenesis-related protein PR-4B

–

Nitab4.5_0008835g0020

3.27

PREDICTED: pathogenesis-related protein STH-2-like

–

Nitab4.5_0004861g0030

3.24

PREDICTED: pathogenesis-related protein 1C-like

PRB1

Nitab4.5_0004861g0040

3.16

PREDICTED: pathogenesis-related protein 1C

–

Nitab4.5_0008375g0050

3.06

PREDICTED: pathogenesis-related protein STH-2-like

HEL

Nitab4.5_0009495g0020

2.73

PREDICTED: pathogenesis-related protein PR-4A

TL1

Nitab4.5_0008011g0010

2.29

PREDICTED: pathogenesis-related protein 5-like isoform X1

–

Nitab4.5_0000194g0120

2.17

PREDICTED: pathogenesis-related protein STH-2-like

CRF2

Nitab4.5_0000105g0290

2.06

PREDICTED: pathogenesis-related genes transcriptional activator PTI6-like

CRF2

Nitab4.5_0002902g0060

1.11

PREDICTED: pathogenesis-related genes transcriptional activator PTI6-like

MOS11

Nitab4.5_0002073g0060

−1.47

PREDICTED: pathogenesis-related protein PRMS-like

CRF2

Nitab4.5_0000586g0010

−2.67

PREDICTED: pathogenesis-related genes transcriptional activator PTI6-like

CRF2

Nitab4.5_0007730g0010

−2.72

PREDICTED: pathogenesis-related genes transcriptional activator PTI6-like