From: Genome-wide association study of quality traits and starch pasting properties of maize kernels
Trait | SNP | Chr | Genotype | Bin | Position | P-value | Environment |
---|---|---|---|---|---|---|---|
PV | SYN12772 | 3 | A/G | 3.03 | 35,084,281 | 4.40E-05 | 2016JZ |
PZE_103091447 | 3 | G/T | 3.05 | 147,223,326 | 5.26E-06 | 2016JZ | |
PZE_103096842 | 3 | A/G | 3.05 | 155,433,336 | 2.35E-05 | 2016JZ | |
PZE_105156016 | 5 | A/C | 5.06 | 204,313,319 | 5.36E-05 | 2015LY | |
PZE_109088783 | 9 | A/G | 9.05 | 132,519,775 | 5.29E-05 | 2017JZ | |
TV | PZE_103091447 | 3 | G/T | 3.05 | 147,223,326 | 8.95E-05 | 2016JZ |
PZE_105155546 | 5 | A/C | 5.05 | 204,021,851 | 6.33E-05 | 2016JZ | |
PZE_105156016 | 5 | A/C | 5.06 | 204,313,319 | 6.21E-05 | 2015LY | |
PZE_106067257 | 6 | C/T | 6.04 | 120,189,163 | 2.74E-05 | 2016JZ | |
PZE_108073083 | 8 | C/T | 8.05 | 126,033,112 | 1.11E-05 | 2017JZ | |
PZE_108100984 | 8 | C/T | 8.06 | 155,557,132 | 3.44E-05 | 2017JZ | |
PZE_109109322 | 9 | C/T | 9.06 | 145,602,633 | 6.84E-05 | 2016JZ | |
BD | PZE_101120543 | 1 | G/T | 1.05 | 148,525,339 | 8.89E-06 | 2016JZ |
PZE_103094159 | 3 | A/C | 3.05 | 151,148,617 | 8.56E-05 | 2016JZ | |
PZE_103084229 | 3 | C/T | 3.05 | 135,898,087 | 4.29E-05 | 2017JZ | |
PZE_105054501 | 5 | G/T | 5.03 | 50,733,228 | 1.25E-05 | 2017JZ | |
SYN21058 | 6 | A/G | 6.00 | 3,779,374 | 1.96E-07 | 2017JZ | |
SYN11767 | 9 | A/C | 9.02 | 14,438,563 | 2.06E-05 | 2016JZ | |
FV | PZE_101122760 | 1 | C/T | 1.05 | 153,387,202 | 5.75E-05 | 2015LY |
PZE_101147239 | 1 | C/T | 1.06 | 190,610,531 | 1.00E-06 | 2016JZ | |
PZE_103046325 | 3 | G/T | 3.04 | 48,015,853 | 6.88E-05 | 2015LY | |
PZE_103096842 | 3 | A/G | 3.05 | 155,433,336 | 1.72E-06 | 2016JZ | |
PZE_104089684 | 4 | A/G | 4.06 | 164,750,722 | 4.08E-05 | 2015LY | |
PZE_106039028 | 6 | A/C | 6.01 | 86,297,303 | 1.31E-06 | 2016JZ | |
PZE_106067257 | 6 | C/T | 6.04 | 120,189,163 | 3.64E-06 | 2017JZ | |
SYN26334 | 9 | A/C | 9.05 | 132,885,794 | 2.98E-05 | 2015LY | |
PZE_110040421 | 10 | A/C | 10.03 | 77,111,930 | 1.65E-06 | 2017JZ | |
SB | PZE_101122760 | 1 | C/T | 1.05 | 153,387,202 | 5.95E-05 | 2015LY |
PZE_103046325 | 3 | G/T | 3.04 | 48,015,853 | 7.12E-05 | 2015LY | |
PZE_104089684 | 4 | A/G | 4.06 | 164,750,722 | 5.71E-05 | 2015LY | |
PZE_104099048 | 4 | C/T | 4.07 | 174,469,971 | 1.23E-06 | 2016JZ | |
PZE_106039028 | 6 | A/C | 6.01 | 86,297,303 | 7.74E-06 | 2016JZ | |
PZE_107043379 | 7 | C/T | 7.02 | 74,685,305 | 2.88E-05 | 2016JZ | |
SYN26334 | 9 | A/C | 9.05 | 132,885,794 | 3.43E-05 | 2015LY | |
PZE_110040421 | 10 | A/C | 10.03 | 77,111,930 | 6.09E-06 | 2017JZ | |
PT | SYN9068 | 1 | A/C | 1.07 | 210,940,058 | 2.56E-05 | 2015QZ |
SYN33389 | 3 | A/C | 3.08 | 213,893,310 | 7.71E-06 | 2016JZ | |
PZE_104099048 | 4 | C/T | 4.07 | 174,469,971 | 3.86E-05 | 2015LY | |
PZE_106049618 | 6 | C/T | 6.03 | 98,823,263 | 3.78E-09 | 2016JZ | |
PZE_107060445 | 7 | C/T | 7.02 | 110,670,176 | 6.58E-06 | 2017JZ | |
PZE_107060447 | 7 | A/C | 7.02 | 110,670,253 | 2.86E-05 | 2017JZ | |
SYN32385 | 7 | G/T | 7.03 | 129,793,852 | 7.70E-05 | 2016JZ | |
SYN32384 | 7 | A/G | 7.03 | 129,793,957 | 7.70E-05 | 2016JZ | |
PTP | PZE_104039782 | 4 | C/T | 4.05 | 59,365,625 | 3.71E-05 | 2017JZ |
PZE_105099535 | 5 | C/G | 5.04 | 146,962,269 | 8.28E-05 | 2015LY | |
PZE_106103881 | 6 | A/G | 6.06 | 155,397,283 | 2.64E-05 | 2017JZ | |
PZE_108031001 | 8 | C/G | 8.03 | 35,001,109 | 2.41E-05 | 2015LY | |
PZE_109054108 | 9 | G/T | 9.03 | 90,505,476 | 3.77E-06 | 2015LY |