Table 8 Information of candidate gene associated with pasting properties
From: Genome-wide association study of quality traits and starch pasting properties of maize kernels
Trait | SNP | Candidate gene | Candidate gene function |
|---|---|---|---|
PV | SYN12772 | GRMZM2G314563 | GPI ethanolamine phosphate transferase 3 |
PZE_103091447 | GRMZM2G361501 | junction endonuclease MUS81 | |
PZE_105156016 | GRMZM2G357923 | ATP-dependent RNA helicase DEAH13 | |
PZE_109088783 | GRMZM2G007514 | protein SCAR2 | |
TV | PZE_103091447 | GRMZM2G361501 | junction endonuclease MUS81 |
PZE_105155546 | GRMZM2G090609 | caleosin related protein | |
PZE_105156016 | GRMZM2G357923 | ATP-dependent RNA helicase DEAH13 | |
PZE_106067257 | GRMZM2G333923 | DUF679 domain membrane protein 7 | |
PZE_108073083 | GRMZM2G090963 | ATP-dependent DNA helicase Q-like SIM | |
PZE_108100984 | GRMZM2G149535 | Amino acid kinase family protein | |
PZE_109109322 | GRMZM2G028643 | serine/threonine-protein kinase At2g14440 | |
BD | PZE_101120543 | GRMZM2G135045 | Xaa-Pro aminopeptidase 3 |
PZE_103094159 | GRMZM2G146280 | phosphoinositide-interacting protein 3 | |
PZE_103084229 | GRMZM2G046610 | methyltransferase PMT27 | |
PZE_105054501 | GRMZM2G177535 | tyrosine-sulfated glycopeptide receptor 1 | |
SYN21058 | GRMZM2G143646 | pentatricopeptide repeat-containing protein | |
SYN11767 | GRMZM2G000423 | 2-oxoglutarate (2OG) and Fe(II) dependent oxygenase super family protein | |
FV | PZE_101147239 | GRMZM2G166407 | pentatricopeptide repeat-containing protein |
PZE_104089684 | GRMZM2G122843 | signal peptide peptidase family protein | |
PZE_106039028 | GRMZM2G416386 | aminodeoxychorismate synthase | |
PZE_106067257 | GRMZM2G333923 | DUF679 domain membrane protein 7 | |
SYN26334 | LOC103639262 | rab3 GTPase-activating protein catalytic subunit | |
SB | PZE_101122760 | LOC103639905 | pectinesterase 11 |
PZE_104089684 | GRMZM2G122843 | signal peptide peptidase family protein | |
PZE_106039028 | GRMZM2G416386 | aminodeoxychorismate synthase | |
PZE_107043379 | GRMZM2G363052 | AP2/EREBP transcription factor super family protein | |
SYN26334 | LOC103639262 | rab3 GTPase-activating protein catalytic subunit | |
PT | SYN9068 | GRMZM2G131205 | cinnamoyl CoA reductase 1 |
SYN33389 | GRMZM2G121878 | carbonic anhydrase | |
PZE_106049618 | GRMZM2G074438 | transcription factor bHLH48 | |
PZE_107060445 | GRMZM2G066171 | RING zinc finger domain super family protein | |
SYN32385 | GRMZM2G059225 | ADP-ribosylation factor GTPase-activating protein AGD3 | |
PTP | PZE_104039782 | GRMZM2G085000 | Thioredoxin family protein |
PZE_105099535 | GRMZM2G138423 | ADP,ATP carrier protein | |
PZE_106103881 | GRMZM2G158526 | centromeric histone H3 | |
PZE_108031001 | GRMZM2G331566 | endoglucanase 1 | |
PZE_109054108 | GRMZM2G348666 | Isoleucine–tRNA ligase cytoplasmic |