Fig. 4

Allele frequencies of different C3 colonies. a Allele frequency distribution of C3 genomic DNA that was amplified from the sample used for Illumina sequencing. b Allele frequency distribution of amplified C3 genomic DNA from a previously isolated sample. c Allele frequencies of two C3 colonies, of which ~ 50 spores and mycelium were isolated and amplified. d Principal component analysis of different C3 DNA samples and A4, based on allele frequencies of shared SNPs. e: MAT locus proportions based on whole genome Illumina sequencing data of different C3 DNA samples and A4. f ddPCR results of other, newly isolated C3 colonies. Note, C3_ddPCR pacbio refers to the WGA amplified version of the DNA shown in lane 1. C3_dd1,2,4,5 and 8 represent unamplified DNA samples for 5 different root culture plates