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Fig. 1 | BMC Genomics

Fig. 1

From: Genome-wide identification and expression analysis of the cyclic nucleotide-gated ion channel (CNGC) gene family in Saccharum spontaneum

Fig. 1

Amino acid sequence alignment, phylogenetic tree, gene structures, and conserved motif analysis of the CNGC gene family members in S. spontaneum. a Amino acid sequence alignment of SsCNGCs. CNBD is highlighted by blue box, Phosphate Binding Cassette, Hinge, CaMBD and IQ motif are highlighted by black underline. b The phylogenetic tree was constructed based on the aa sequence of SsCNGCs using MEGA 7.0 and the Multiple Sequence Comparison by Log-Expectation (MUSCLE) method. c Gene structures of SsCNGCs. Yellow and blue boxes indicate exons of coding and noncoding regions, respectively; black lines indicate introns. d Conserved motifs of SsCNGC proteins were discovered using MEME tools. The order of the motifs is consistent with their position in the protein sequence. Different colored boxes represent different conserved motifs

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