Sr. No | Epitopes | Symbol | Protein | Position | HLA-1/HLA-2 | Antigenicity | BLASTp (E-score) | Toxicity (SVM value) | Conservancy |
---|---|---|---|---|---|---|---|---|---|
1 | APRKKGCWK | NC1 | Nucleocapsid | 30–38 | HLA-1 | 0.6832 | 28 | -0.48 | 83.88 |
2 | PRKKGCWKC | NC2 | Nucleocapsid | 31–39 | HLA-1 | 1.4065 | 55 | -0.26 | 83.94 |
3 | RKKGCWKCG | NC3 | Nucleocapsid | 32–40 | HLA-1 | 1.5171 | 55 | -0.1 | 83.94 |
4 | PLTEEKIKA | RT1 | Reverse Transcriptase | 25–33 | HLA-1 | 0.7833 | 13 | -1.4 | 92.85 |
5 | KRTQDFWEV | RT2 | Reverse Transcriptase | 82–90 | HLA-1 | 1.1553 | 1.6 | -1.49 | 91.78 |
6 | RTQDFWEVQ | RT3 | Reverse Transcriptase | 83–91 | HLA-1 | 1.421 | 1.6 | -1.61 | 91.86 |
7 | TQDFWEVQL | RT4 | Reverse Transcriptase | 84–92 | HLA-1 | 0.716 | 1.6 | -1.79 | 95.45 |
8 | AHKGIGGNE | RT5 | Reverse Transcriptase | 538–546 | HLA-1 | 0.6955 | 78 | -1.05 | 98.21 |
9 | FRVYYRDSR | Int1 | Integrase | 223–231 | Both | 0.8423 | 6.7 | -1.36 | 88.12 |
10 | VYYRDSRDP | Int2 | Integrase | 225–233 | HLA-2 | 0.7874 | 1.2 | -0.86 | 86.67 |
11 | ERAEDSGNE | VPU1 | VPU | 48–56 | HLA-1 | 0.6154 | 4.7 | -1.14 | 82.84 |