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Table 4 Statistics of HIV-1a and HIV-1b structures before and after refinement

From: Employing computational tools to design a multi-epitope vaccine targeting human immunodeficiency virus-1 (HIV-1)

Characteristics

HIV-1a

HIV-1b

Before refinement

After refinement

Before refinement

After refinement

GALAXY energy

17,623.80

-1874.85

29,357.35

-2694.01

Rama-favored rotamers (%)

86.9

95.8

84.7

97.2

Poor rotamers (%)

10.7

2.1

2.4

2.8

RMSD

0.0

2.096

0.0

1.158

  1. GALAXY energy, Rama-favored and poor rotamers, and Root Mean Square Deviation (RMSD) of HIV-1a and HIV-1b structures before and after refinement
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BMC Genomics

ISSN: 1471-2164

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