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Table 5 Differentially expressed genes in i-L2 NL1-RHg at 8d.

From: Population-specific gene expression in the plant pathogenic nematode Heterodera glycines exists prior to infection and during the onset of a resistant or susceptible reaction in the roots of the Glycine max genotype Peking

R-8 DAY-INDUCED

Afx ID

Array ID

Best Hit ID

E-value

Best Hit Organism

Best Hit Description

FC

P-value

q-value(%)

HgAffx.2725.1.S1_at

AF490251.1

AAO85459

1.00E-103

Heterodera glycines

putative gland protein G20E03

12.7

0.000118

0

HgAffx.22770.1.S1_at

AF469060.1

AAN32889

2.00E-45

Heterodera glycines

ubiquitin extension protein

9.22

0.00353

1.523165321

HgAffx.20740.1.S1_at

CD748921

NP_498657

1.00E-26

Caenorhabditis elegans

R13A5.6

9.18

0.00964

6.920221232

HgAffx.20813.1.S1_at

AF502393.1

AAP30836

3.00E-83

Heterodera glycines

putative gland protein G30C02; Hg-G30C02

8.73

0.0000945

0

HgAffx.20336.1.S1_at

AF044210.1

AAC33848

2.00E-172

Heterodera glycines

beta-1,4-endoglucanase-3 precursor

8.55

0.00254

1.068579553

HgAffx.20336.2.S1_s_at

AY043224.1

AAK85303

0

Heterodera glycines

beta-1,4-endoglucanase-4

6.66

0.00374

1.912614015

HgAffx.22005.1.S1_s_at

AF502392.1

AAP30835

1.00E-136

Heterodera glycines

putative gland protein G33E05; Hg-G33E05

2.99

0.0032

1.523165321

R-8 DAY-SUPPRESSED

        

Afx ID

Array ID

Best Hit ID

E-value

Best Hit Organism

Best Hit Description

FC

P-value

q-value(%)

HgAffx.17401.1.S1_at

CB825108

NP_495430

2.00E-84

Caenorhabditis elegans

steroid Alpha ReducTase family member (art-1)

-17

0.0000588

0

HgAffx.7076.1.S1_at

Y13906.1

CAA74204

2.00E-158

Heterodera glycines

serine proteinase

-16.4

0.000412

0

HgAffx.1292.1.S1_at

CB378350

NP_783594

1.00E-21

Mus musculus

histone cluster 1, H2ba

-15.5

0.00451

0.280100042

HgAffx.14690.2.S1_at

CB826267

XP_001668392

6.00E-34

Caenorhabditis briggsae AF16

Hypothetical protein CBG12388

-15.2

0.00248

0.177088891

HgAffx.19766.1.S1_at

CB375606

AAG21338

4.00E-12

Heterodera glycines

hypothetical esophageal gland cell secretory protein 9

-12.7

0.00155

0.177088891

HgAffx.22425.1.S1_at

BI396655

NP_501123

1.00E-19

Caenorhabditis elegans

COLlagen family member (col-113)

-12.5

0.000818

0.177088891

HgAffx.2920.1.S1_at

CK349770

AAL78218

5.00E-48

Heterodera glycines

histone Hgg-28

-12.1

0.0124

0.60765796

HgAffx.17467.1.S1_at

CB299232

NP_509186

4.00E-15

Caenorhabditis elegans

Carbonic AnHydrase family member (cah-5)

-11.9

0.000438

0

HgAffx.3069.1.S1_at

CK350667

XP_001175793

2.00E-18

Strongylocentrotus purpuratus

PREDICTED: similar to histone H2A

-11.7

0.00802

0.48372909

HgAffx.18866.1.S1_at

CA940314

CAB88204

5.00E-20

Globodera pallida

putative cuticular collagen

-11.7

0.00213

0.177088891

HgAffx.17449.1.S1_at

CK348660

XP_001541426

5.00E-16

Ajellomyces capsulatus NAm1

histone H2A

-11.1

0.0143

0.817748094

HgAffx.2088.1.S1_at

CK351923

XP_001668016

2.00E-25

Caenorhabditis briggsae AF16

Hypothetical protein CBG03859

-11.1

0.00765

0.41363165

HgAffx.2863.1.S1_at

CK349827

AAR85527

6.00E-46

Meloidogyne incognita

14-3-3b protein

-10.3

0.0195

1.068579553

HgAffx.11150.1.S1_at

CB378957

NP_508280

3.00E-96

Caenorhabditis elegans

D1005.1

-10.3

0.00107

0.177088891

HgAffx.7347.1.S1_at

CK394435

XP_001672273

4.00E-19

Caenorhabditis briggsae AF16

Hypothetical protein CBG11380

-10.2

0.0123

0.60765796

HgAffx.10212.1.S1_at

CB378289

XP_001678368

1.00E-12

Caenorhabditis briggsae AF16

Hypothetical protein CBG21909

-9.72

0.0062

0.280100042

HgAffx.11037.1.S1_at

CB935417

XP_001670890

0

Caenorhabditis briggsae AF16

Hypothetical protein CBG19828

-9.63

0.000703

0.177088891

HgAffx.19641.1.S1_at

CD748996

XP_001895768

6.00E-22

Brugia malayi

Probable 3-hydroxyacyl-CoA dehydrogenase B0272.3

-9.62

0.0112

0.60765796

HgAffx.1801.1.S1_at

CK350930

XP_001429543

1.00E-36

Paramecium tetraurelia strain d4-2

hypothetical protein GSPATT00032377001

-9.21

0.0156

0.913385871

HgAffx.9435.1.S1_at

CB379066

XP_001673815

3.00E-59

Caenorhabditis briggsae AF16

Hypothetical protein CBG23138

-9.16

0.0127

0.60765796

  1. Probe set lists that are induced in NL1-RHg at 8d that ultimately undergo a resistant reaction. FC-NL1-RHg, fold change-NL1-RHg; PV-NL1-RHg, p-value-NL1-RHg. A> |1.5| fold cutoff and P ≤ 0.05 was used. FDR (set at 10%) parameters are: Score (d), q-value (%).