Skip to main content

Table 4 Cross-species amplification of S. latifolia EST-SSRs

From: A White Campion (Silene latifolia) floral expressed sequence tag (EST) library: annotation, EST-SSR characterization, transferability, and utility for comparative mapping

Locus

size range (bp)

 

S. dioica

S. diclinis

S. vulgaris

S. nutans

S. acaulis

S. colpophylla

S. ciliata

SL_eSSR01

223–236

226

218–230

227

390

-

-

SL_eSSR02

209–228

217–221

-

182–235

271–273

213

230

SL_eSSR03

210–262+

241

236–245

-

-

-

-

SL_eSSR04

164–184

160–175

160–164

167–170

170

173–182

-

SL_eSSR05

233–240

235–249

184–198

236–239

219–239

235–258+

218–220

SL_eSSR06

156–176

173–185

174–183

-

-

-

-

SL_eSSR07

164–178

173–183

-

-

181

-

-

SL_eSSR08

235–270

252–261

-

222–225

214–237

227–237

230–248

SL_eSSR09

234

234

-

-

-

-

-

SL_eSSR10

332–356

351–362

-

-

-

-

-

SL_eSSR11

-

-

-

-

-

-

-

SL_eSSR12

170–187

173–179

174–183

191

186–196

199–201

173–177+

SL_eSSR13

206–216

214

-

208–286

208–286

-

208–286

SL_eSSR14

326–329

338

-

160

-

-

338–400

SL_eSSR15

219–236

257–281+

-

-

-

-

-

SL_eSSR16

185–198

192–200

161–169

175–183

192–206

178

197–204

SL_eSSR17

231–289

242–246

209–223

222–230

227

228–230

195

SL_eSSR18

267–291

250–252

-

277

257–263

-

-

SL_eSSR19

182–198

-

-

190

190–205

-

180

SL_eSSR20

194–200

202

167–207

187–196

202

202

205

SL_eSSR21

236–241

223

-

-

-

239

-

SL_eSSR22

166–190

172–184

166–170

185

160–166

167–185+

151–184

SL_eSSR23

211–217

202–208

-

187

187

178–187

-

SL_eSSR24

198–212

210

-

-

-

-

-

SL_eSSR25

227–262+

227–253

201–262+

-

-

201–245

241

SL_eSSR26

207–213

210

208

210

-

214–223

211

SL_eSSR27

236–251

245–257

239–248

245

243–255

239–248+

245

SL_eSSR28

190–210

195

195–212

204

192–204

-

-

SL_eSSR29

214–233

232–247

-

236–247

-

-

-

SL_eSSR30

-

-

-

-

-

-

-

  1. - no amplification
  2. + duplicated locus