Figure 3

Example peaks taken from the isolated set of OCT4 target genes. Example peaks within the promoter regions of a) CDX2 and b) FOXD3, two of the isolated OCT4 target genes. The coloured lines refer to the thresholds corresponding to the quantiles given in Figure 1a. The motifs represent the octamer motif mapped to the respective promoter regions. The two-sided arrows illustrate the sub sequences taken for the de novo motif discovery.