Figure 6
From: The mitochondrial genomes of the ciliates Euplotes minuta and Euplotes crassus
Alignment analysis of Euplotes cox2. a) ClustalW alignment of cox2 from other ciliates and Euplotes; b) conservation, quality and consensus scores of the multiple alignment in (a) according to Jalview; c) Pfam search result including an insignificant hit to the Cox2 Pfam domain in the N-terminal conserved region of the gene; d) number of non-synonymous (ds) and synonymous (ds) base substitutions observed between E. minuta and E. crassus per 69 nt sliding window; e) dn/ds ratio based on (d).