Table 4 New variable AluYb8/9 loci identified by ME-Scan
From: Mobile element scanning (ME-Scan) by targeted high-throughput sequencing
Individual | Index | New* AluYb8/9 | Positive genotypes checked by PCR | False positives | Negative genotypes checked by PCR | False negatives |
|---|---|---|---|---|---|---|
Replication | Â | Â | Â | Â | Â | Â |
A | ACCAT | 259 | 35 | 1 | 9 | 0 |
A | TATTC | 273 | 35 | 1 | 9 | 0 |
Pooling | Â | Â | Â | Â | Â | Â |
A | ACCAT | 163 | 32 | 3 | 12 | 5 |
B | TATTC | 153 | 20 | 2 | 22 | 3 |
C | GGTTA | 168 | 19 | 1 | 23 | 5 |
D | CGCTA | 242 | 27 | 1 | 16 | 0 |
D | TTGAT | 290 | 27 | 1 | 16 | 0 |
Combined | All | 487 | 195 | 10 | 107 | 13 |