Skip to main content

Table 1 SSR genomic sequence distribution summary statistics

From: Mining non-model genomic libraries for microsatellites: BAC versus EST libraries and the generation of allelic richness

 

BAC library

EST library

Reads • SSR-1

11.89

26.11

Bases • SSR-1 (kb)

7.048

18.49

% SSR sequence

0.27%

0.06%

Number of repeats

9.96

5.92

  1. Mean number of sequencing reads per SSR, mean kilobases of sequence per observed SSR, percentage of total library sequence contained in SSR motifs, and mean number of repeats per SSR. All data are partitioned by genomic library (i.e. EST library or BAC library sequence). SSR sequences are typically more common in BAC library sequence than in EST library sequence.
Back to article page

BMC Genomics

ISSN: 1471-2164

Contact us