From: Multi-targeted priming for genome-wide gene expression assays
 | Saccharomyces cerevisiae | Neurospora crassa | ||||
---|---|---|---|---|---|---|
Feature | Nitrogen depletion | Protoperithecial developmenr | ||||
 | Oligo (dT) | MTP | Common | Oligo (dT) | MTP | Common |
Number of well measured genes1 on the array | 4620 | 6042 | 4573 | 469 | Â | 416 |
Number of genes significantly differentially expressed (P ≤ 0.05) | 2155 | 3577 | 1839 | 172 | 406 | 2021 |
Number of up-regulated genes (P ≤ 0.05) | 1080 | 1855 | 925 | 66 | 232 | 31 |
Number of down-regulated genes (P ≤ 0.05) | 1075 | 1722 | 912 | 106 | 174 | 61 |
Highest gene expression ratio | 49.15 | 32.6 | Â | 24.26 | 10.74 | Â |
Average gene expression ratio | 2.05 | 1.77 | Â | 1.96 | 1.43 | Â |
GEL502 | 1.51 | 1.27 | Â | 1.91 | 2.08 | Â |
Number of genes with gene expression ratio greater or equal to GEL50 (P ≤ 0.05) | 1237 | 2617 | 1166 | 102 | 141 | 52 |