Table 4 Comparison of expression levels (log2ratio) from qRT-PCR and microarray for selected target genes
From: Development and validation of a flax (Linum usitatissimum L.) gene expression oligo microarray
Target Transcript | Gene ID | Microarray value (Log2ratio) | qRT-PCR value (Log2ratio) |
|---|---|---|---|
Lipoxygenase LOX2 | c20715 | 7.86465 | 17.6 |
Chlorophyll a-b binding protein 3C-like | c2491 | 3.9446 | 7.47 |
RuBisCO activase 2 | c602 | 4.5263 | 12.185 |
DNA-directed RNA polymerase II | c21991 | 0.01865 | -0.015 |
Calmodulin TaCaM2-1 | c24118 | -0.10225 | 0.295 |
Ubiquitin carboxyl- terminal hydrolase | c9380 | 0.05875 | 0.215 |
Cellulose synthase | c2533 | -4.5911 | -7.37 |
Laccase | c3323 | -6.3722 | -7.31 |
Fasciclin-like AGP 4 | c2370 | -6.7035 | -9.72 |